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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CACTIN, cactin, spliceosome C complex subunit
Sequence ID:NM_001080543
NM_021231
Entrez Gene ID:58509
Ensembl ID:ENSG00000105298

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 3610637 - 3611721

 Exon Info From UCSC:
NM_001080543
NM_021231

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069243Full LengthBC172549chromosome 19 open reading frame 29
3609158IncompleteBC004262chromosome 19 open reading frame 29
5113225IncompleteBC019848chromosome 19 open reading frame 29
100063054BC156484chromosome 19 open reading frame 29

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080543 NP_001074012 Q8WUQ7  
NM_021231 NP_067054    

Related Sequences

 
mRNAGenPeptSwissProt
AF155102 AAD42868 Q8WUQ7
BC004262 AAH04262 Q8WUQ7
BC019848 AAH19848 Q8WUQ7
BC156484 AAI56485  
BC172549 AAI72549  
AY917150 AAX84551 Q8WUQ7
AK299963 BAG61789 B4DSX7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C19orf29 NP_001074012 M.musculus 2510012J08Rik 70312 Gene Info NP_081657 88
R.norvegicus RGD1563634 500790   NP_001074916 88
A.gambiae AgaP_AGAP006542 1277141   XP_316580 56
D.melanogaster cactin 33043   NP_523422 53
A.thaliana AT1G03910 839371   NP_171887 44
C.elegans cacn-1 175066   NP_496951 42
N.crassa NCU08633 3880974   XP_964841 41
S.pombe SPBC2F12.12c 2540353   NP_595704 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)