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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CST11, cystatin 11
Sequence ID:NM_080830
NM_130794
Entrez Gene ID:140880
Ensembl ID:ENSG00000125831

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 23431040 - 23433482

 Exon Info From UCSC:
NM_080830
NM_130794

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40119721Full LengthBC121079cystatin 11
40119722Full LengthBC121080cystatin 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_570612  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080830 NP_543020    
NM_130794 NP_570612 Q9H112 Cystatin

Related Sequences

 
mRNAGenPeptSwissProt
BC121079 AAI21080 Q9H112
BC121080 AAI21081 Q9H112
AF335480 AAL71991 Q9H112
AF335481 AAL71992 Q9H112

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CST11 NP_570612 M.musculus Cst11 78240 Gene Info NP_084335 54
R.norvegicus Cst11 245916   NP_620785 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)