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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CLN8, Ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
Sequence ID:NM_018941
RefSeqGene ID:NG_008656
Entrez Gene ID:2055
Ensembl ID:ENSG00000182372

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 1711940 - 1728933

NM_018941 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
118217118691712050
18384817190971719762
849716817284151734734

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4303103Full LengthBC007725ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
9020816Full LengthBC136825ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018941 NP_061764 Q9UBY8  

Related Sequences

 
mRNAGenPeptSwissProt
AF123757 AAF13115 Q9UBY8
AF123758 AAF13116 Q9UBY8
AF123759 AAF13117 Q9UBY8
AF123760 AAF13118 Q9UBY8
AF123761 AAF13119 Q9UBY8
BC007725 AAH07725 Q9UBY8
BC136825 AAI36826 B9EGV9
BT007049 AAP35698 Q9UBY8
AK096736 BAC04854  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLN8 NP_061764 M.musculus Cln8 26889 Gene Info NP_036130 86
R.norvegicus Cln8 306619   NP_001007687 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)