Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXC11, homeobox C11
Sequence ID:NM_014212
Entrez Gene ID:3227
Ensembl ID:ENSG00000123388

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 54366981 - 54370203

NM_014212 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17985436690954367706
79915015436896454369666
152020535436966754370200

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3462682Full LengthBC001543homeobox C11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055027  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014212 NP_055027 O43248 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC001543 AAH01543 O43248
HQ447392 ADQ31878  
AK291946 BAF84635 O43248
AJ000041 CAA03876 O43248

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXC11 NP_055027 R.norvegicus Hoxc10 315338   XP_235698 98
M.musculus Hoxc10 209448 Gene Info NP_034592 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)