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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CA13, Carbonic anhydrase XIII
Sequence ID:NM_198584
Entrez Gene ID:377677
Ensembl ID:ENSG00000185015

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 86158006 - 86196302

NM_198584 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13798615771586158093
3805778616296886163165
5786968617164986171767
6977928617883686178931
7938558618013086180192
85610118618070086180855
101238558619345886196301

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6083105Full LengthBC052602carbonic anhydrase XIII

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_940986  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_198584 NP_940986 Q8N1Q1 EC 4.2.1.1 Carb_anhydrase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC052602 AAH52602 Q8N1Q1 EC 4.2.1.1
HQ447655 ADQ32140    
AK095314 BAC04528 Q8N1Q1 EC 4.2.1.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CA13 NP_940986 R.norvegicus Car13 499566   NP_001128465 92
M.musculus Car13 71934 Gene Info NP_078771 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)