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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTPRE, protein tyrosine phosphatase, receptor type, E
Sequence ID:NM_006504
NM_130435
RefSeqGene ID:NG_029511
Entrez Gene ID:5791
Ensembl ID:ENSG00000132334

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 129705389 - 129854431

 Exon Info From UCSC:
NM_006504
NM_130435

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5274802Full LengthBC050062protein tyrosine phosphatase, receptor type, E

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006495  NP_569119  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006504 NP_006495 P23469 EC 3.1.3.48 Y_phosphatase
NM_130435 NP_569119     Y_phosphatase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U36623 AAC50324 P23469 EC 3.1.3.48
BC050062 AAH50062 P23469 EC 3.1.3.48
AF406557 AAL01375 Q96P81  
JF432831 ADZ16048    
AK290414 BAF83103 A8K2Z9  
AK291828 BAF84517 P23469 EC 3.1.3.48
AK299498 BAG61455 B4DRZ3  
AK300613 BAG62307 B4DUE5  
X54134 CAA38069 P23469 EC 3.1.3.48
AJ315969 CAC86583 P23469 EC 3.1.3.48
AJ430580 CAD23182 Q8TE48  
AL832042 CAH10411 Q69YS2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTPRE NP_006495 M.musculus Ptpre 19267 Gene Info NP_035342 94
R.norvegicus Ptpre 114767   NP_446219 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)