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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC47A2, Solute carrier family 47, member 2
Sequence ID:NM_152908
NM_001256663
NM_001099646
Entrez Gene ID:146802
Ensembl ID:ENSG00000180638

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 19581833 - 19619886

 Exon Info From UCSC:
NM_152908
NM_001099646

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5189385Full LengthBC035288solute carrier family 47, member 2
5759988Full LengthBC050578solute carrier family 47, member 2
5187512IncompleteBC062614hypothetical protein FLJ31196

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_690872  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001099646 NP_001093116    
NM_001256663 NP_001243592    
NM_152908 NP_690872 Q86VL8 MatE

Related Sequences

 
mRNAGenPeptSwissProt
BC035288 AAH35288 Q86VL8
BC050578 AAH50578 Q86VL8
AB250364 BAF36847 Q86VL8
AB250701 BAF37007 Q86VL8
BX648861 CAH56154 Q86VL8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC47A2 NP_690872 N.crassa NCU07720 3878118   XP_961970 35
A.thaliana AT4G23030 828402   NP_194034 34
A.thaliana ZF14 842203   NP_564731 32
S.pombe SPCC4B3.13 2539460   NP_588077 32
S.pombe SPAC323.07c 2541632   NP_594377 32
N.crassa NCU00755 3880307   XP_964152 32
S.cerevisiae YDR338C 851938   NP_010625 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)