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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACCS, 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
Sequence ID:NM_001127219
NM_032592
Entrez Gene ID:84680
Ensembl ID:ENSG00000110455

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 44087817 - 44105569

 Exon Info From UCSC:
NM_001127219
NM_032592

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3632065Full LengthBC0201971-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115981  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001127219 NP_001120691    
NM_032592 NP_115981 Q96QU6 Aminotran_1_2

Related Sequences

 
mRNAGenPeptSwissProt
BC020197 AAH20197 Q96QU6
AY026508 AAK11482 Q96QU6
AK057649 BAB71541 Q96QU6
AK302515 BAG63791 B4DYM9
AK304074 BAG64981 B4E219

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACCS NP_001120691 M.musculus Accs 329470 Gene Info NP_899043 84
R.norvegicus Accs 311218   XP_001074505 82
A.thaliana ACS5 836709   NP_201381 35
A.thaliana ACS9 824132   NP_190539 35
A.thaliana ACS8 829933   NP_195491 34
A.thaliana ACS4 816812   NP_179866 34
A.thaliana ACS11 826317   NP_567330 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)