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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FRAT1, Frequently rearranged in advanced T-cell lymphomas
Sequence ID:NM_005479
Entrez Gene ID:10023
Ensembl ID:ENSG00000165879

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 99079097 - 99081097

NM_005479 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
126519907902199081671

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4823463Full LengthBC034476frequently rearranged in advanced T-cell lymphomas

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005470  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005479 NP_005470 Q92837 GSK-3_bind

Related Sequences

 
mRNAGenPeptSwissProt
U58975 AAB97096 Q92837
BC034476 AAH34476 Q92837
AB074890 BAB86352 Q92837

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FRAT1 NP_005470 M.musculus Frat1 14296 Gene Info NP_032069 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta