Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TRIM5, tripartite motif containing 5
Sequence ID:NM_033034
NM_033092
NM_033093
RefSeqGene ID:NG_029122
Entrez Gene ID:85363
Ensembl ID:ENSG00000132256

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 5686038 - 5701407

 Exon Info From UCSC:
NM_033034
NM_033092
NM_033093

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4122548Full LengthBC021258tripartite motif-containing 5
4733445IncompleteBC020770tripartite motif-containing 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149084  NP_149083  NP_149023  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033034 NP_149023 Q9C035 zf-C3HC4
SPRY
zf-B_box
NM_033092 NP_149083   zf-C3HC4
zf-B_box
NM_033093 NP_149084   zf-C3HC4
zf-B_box

Related Sequences

 
mRNAGenPeptSwissProt
AF220025 AAG53479 Q9C035
AF220026 AAG53480 Q9C035
AF220027 AAG53481 Q9C035
AF220028 AAG53482 Q9C035
AF220029 AAG53483 Q9C035
BC020770 AAH20770 Q05CU3
BC021258 AAH21258 Q9C035
AY625000 AAT48101 Q9C035
DQ288685 ABB90543 Q9C035
HQ447250 ADQ31737  
JF928461 AEN14475 Q9C035
JF928462 AEN14476 Q9C035
AK027593 BAB55218 Q9C035
AB362928 BAG16811 B1Q3L0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRIM5 NP_149023 M.musculus Trim5 667823 Gene Info XP_997808 54
R.norvegicus Trim5 308906   NP_001014045 54
M.musculus Trim12c 319236 Gene Info NP_001139479 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)