Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CROT, carnitine O-octanoyltransferase
Sequence ID:NM_001143935
NM_001243745
NM_021151
Entrez Gene ID:54677
Ensembl ID:ENSG00000005469

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 87021940 - 87029107

 Exon Info From UCSC:
NM_001143935
NM_021151

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5242962Full LengthBC039004carnitine O-octanoyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066974  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001143935 NP_001137407      
NM_001243745 NP_001230674      
NM_021151 NP_066974 Q9UKG9 EC 2.3.1.137 Carn_acyltransf

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF073770 AAD41654 Q9UKG9 EC 2.3.1.137
AF168793 AAF03234 Q9UKG9 EC 2.3.1.137
BC039004 AAH39004 Q9UKG9 EC 2.3.1.137
BC051874 AAH51874 Q86V17  
AK300114 BAG61909 B4DT97  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CROT NP_001137407 M.musculus Crot 74114 Gene Info NP_076222 86
R.norvegicus Crot 83842   NP_114193 85
C.elegans F41E7.6 185624   NP_509729 35
A.gambiae AgaP_AGAP002329 1273639   XP_312640 34
C.elegans T20B3.1 180126   NP_507245 34
D.melanogaster CG12428 43332   NP_651583 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)