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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PLXDC1, Plexin domain containing 1
Sequence ID:NM_020405
Entrez Gene ID:57125
Ensembl ID:ENSG00000161381

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 37219565 - 37221507

 Exon Info From UCSC:
NM_020405

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5298499Full LengthBC036059plexin domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065138  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020405 NP_065138 Q8IUK5 PSI

Related Sequences

 
mRNAGenPeptSwissProt
AF279144 AAG00869 Q8IUK5
BC036059 AAH36059 Q8IUK5
AF378753 AAL11990 Q8IUK5
AY704670 AAV85657 Q8IUK5
AY704671 AAV85658 Q8IUK5
AY704672 AAV85659 Q8IUK5
EU832210 ACE86780  
EU832116 ACE87466  
AK127539 BAC87025 Q6ZSC8
AK312999 BAG35835 Q8IUK5
AK093589 BAG52742 B3KSI0
AK303699 BAG64685 B4E173

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PLXDC1 NP_065138 R.norvegicus Plxdc1 303505   NP_001100516 83
M.musculus Plxdc1 72324 Gene Info NP_001157080 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)