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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BATF2, Basic leucine zipper transcription factor, ATF-like 2
Sequence ID:NM_138456
Entrez Gene ID:116071
Ensembl ID:ENSG00000168062

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 64755416 - 64757745

NM_138456 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
318706475541664757283
187119726476191964762020
197321426476434764764516

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4638025Full LengthBC012330basic leucine zipper transcription factor, ATF-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612465  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138456 NP_612465 Q8N1L9 bZIP_1

Related Sequences

 
mRNAGenPeptSwissProt
BC012330 AAH12330 Q8N1L9
HM134154 ADJ55304 Q8N1L9
AK092453 BAC03894 Q8N1L9
AK096702 BAC04846 Q8N1L9
AK300917 BAG62549 B4DV37

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BATF2 NP_612465 M.musculus Batf2 74481 Gene Info NP_083243 64
R.norvegicus Batf2 309178   XP_219527 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)