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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDH6, cadherin 6, type 2, K-cadherin (fetal kidney)
Sequence ID:NM_004932
Entrez Gene ID:1004
Ensembl ID:ENSG00000113361

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 31193795 - 31323704

 Exon Info From UCSC:
NM_004932

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3506873Full LengthBC000019cadherin 6, type 2, K-cadherin (fetal kidney)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004923  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004932 NP_004923 P55285 Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC000019 AAH00019 P55285
D31784 BAA06562 P55285
AK291290 BAF83979 P55285

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH6 NP_004923 M.musculus Cdh6 12563 Gene Info NP_031692 97
R.norvegicus Cdh6 25409   NP_037059 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)