Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BDH2, 3-hydroxybutyrate dehydrogenase, type 2
Sequence ID:NM_020139
Entrez Gene ID:56898
Ensembl ID:ENSG00000164039

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 104000632 - 104020979

NM_020139 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
182147103998782104000911
21482240104003237104003329
22412299104004027104004085
23002413104006505104006618
24142474104007636104007696
24752583104012333104012441
25842680104013756104013852
26812759104016359104016437
27602851104017339104017430
28522936104020939104021023

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2905279Full LengthBC0019533-hydroxybutyrate dehydrogenase, type 2
4838679Full LengthBC0372773-hydroxybutyrate dehydrogenase, type 2
5284436Full LengthBC0954143-hydroxybutyrate dehydrogenase, type 2

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_020139 NP_064524 Q9BUT1 EC 1.1.1.30  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF164790 AAF80754 Q9BUT1 EC 1.1.1.30
BC001953 AAH01953 Q9BUT1 EC 1.1.1.30
BC037277 AAH37277 Q9BUT1 EC 1.1.1.30
BC095414 AAH95414 Q9BUT1 EC 1.1.1.30
AY358841 AAQ89200 Q9BUT1 EC 1.1.1.30
AK023323 BAB14526 Q9BUT1 EC 1.1.1.30
AK290160 BAF82849 Q9BUT1 EC 1.1.1.30
AK291335 BAF84024 A8K5M0  
AK128463 BAG54681 B3KY19  
AK300626 BAG62318 Q9BUT1 EC 1.1.1.30
CR457309 CAG33590 Q9BUT1 EC 1.1.1.30

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BDH2 NP_064524 M.musculus Bdh2 69772 Gene Info NP_001165526 91
R.norvegicus Bdh2 295458   NP_001099943 89
N.crassa NCU02480 3881214   XP_965074 37
A.thaliana AT4G03140 828065   NP_567251 35
A.thaliana AT3G26760 822289   NP_189311 34
A.thaliana AT3G26770 822290   NP_566798 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)