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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPS30, mitochondrial ribosomal protein S30
Sequence ID:NM_016640
Entrez Gene ID:10884
Ensembl ID:ENSG00000112996

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 44809026 - 44815412

NM_016640 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16394480902644809664
6407854481111044811255
7868914481201644812121
89210684481320744813383
106916684481501444815613

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4123055Full LengthBC007735mitochondrial ribosomal protein S30
3342855IncompleteBC002460mitochondrial ribosomal protein S30

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057724  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016640 NP_057724 Q9NP92 PDCD9

Related Sequences

 
mRNAGenPeptSwissProt
AF146192 AAF65227 Q9NP92
AF217523 AAF67634 Q9NP92
BC002460 AAH02460 Q9BUN6
BC007735 AAH07735 Q9NP92
JF432167 ADZ15384  
AK074777 BAC11202 Q9NP92
AK222704 BAD96424 Q53H77
AK222894 BAD96614 Q53GN7
AL136706 CAB66641 Q9NP92
AL355715 CAB90810 Q9NP92
AL355716 CAB90811 Q9NP92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPS30 NP_057724 M.musculus Mrps30 59054 Gene Info NP_067531 75
R.norvegicus Mrps30 294767   NP_001099882 75
A.gambiae AgaP_AGAP001134 1282032   XP_322027 32
D.melanogaster mRpS30 32530   NP_511167 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)