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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SST, somatostatin
Sequence ID:NM_001048
Entrez Gene ID:6750
Ensembl ID:ENSG00000157005

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 187386852 - 187388180

NM_001048 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
36405187386695187387064
406665187387941187388200

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5240781Full LengthBC032625somatostatin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001039  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001048 NP_001039 P61278 Somatostatin

Related Sequences

 
mRNAGenPeptSwissProt
BC032625 AAH32625 P61278
AK312177 BAG35110 P61278

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SST NP_001039 M.musculus Sst 20604 Gene Info NP_033241 97
R.norvegicus Sst 24797   NP_036791 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta