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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PCLO, piccolo (presynaptic cytomatrix protein)
Sequence ID:NM_014510
NM_033026
Entrez Gene ID:27445
Ensembl ID:ENSG00000186472

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q11.23-q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 82449795 - 82546134

 Exon Info From UCSC:
NM_014510
NM_033026

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6157434IncompleteBC108289piccolo (presynaptic cytomatrix protein)
40033499IncompleteBC125271piccolo (presynaptic cytomatrix protein)
40033500IncompleteBC122565piccolo (presynaptic cytomatrix protein)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014510 NP_055325    
NM_033026 NP_149015    

Related Sequences

 
mRNAGenPeptSwissProt
BC001304 AAH01304 Q9Y6V0
BC108289 AAI08290 Q32P40
BC122565 AAI22566 Q9Y6V0
BC125271 AAI25272 Q9Y6V0
AB011131 BAA25485 Q9Y6V0
AK125999 BAC86386 Q6ZU41
AK297315 BAG59780 B4DM68
Y19188 CAB60727 Q9Y6V0
CR749552 CAH18351 Q68D69

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCLO NP_055325 R.norvegicus Pclo 56768   NP_064483 85
M.musculus Pclo 26875 Gene Info NP_036125 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta