Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CATSPER4, cation channel, sperm associated 4
Sequence ID:NM_198137
Entrez Gene ID:378807
Ensembl ID:ENSG00000188782

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 26517118 - 26529033

NM_198137 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12132651711826517330
2143572651777726517920
3584592652027726520378
4605572652417626524273
5586782652444726524567
6798122652477626524909
8139872652637426526548
98811992652732026527531
120013652652784426528009
136614182652897926529031

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40112485Full LengthBC128138cation channel, sperm associated 4
40112493Full LengthBC128139cation channel, sperm associated 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_937770  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_198137 NP_937770 Q7RTX7 Ion_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC128138 AAI28139 Q7RTX7
BC128139 AAI28140 Q7RTX7
BN000273 CAE30475 Q7RTX7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CATSPER4 NP_937770 R.norvegicus Catsper4 362623   XP_342942 77
M.musculus Catsper4 329954 Gene Info NP_808534 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)