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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. LPAR6, lysophosphatidic acid receptor 6
Sequence ID:NM_001162497
RefSeqGene ID:NG_012874
Entrez Gene ID:10161
Ensembl ID:ENSG00000139679

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 48985485 - 48986603

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5180625Full LengthBC040850purinergic receptor P2Y, G-protein coupled, 5
5269149Full LengthBC045651purinergic receptor P2Y, G-protein coupled, 5
6663864Full LengthBC070295purinergic receptor P2Y, G-protein coupled, 5
40024517Full LengthBC106756purinergic receptor P2Y, G-protein coupled, 5
5271358IncompleteBC039373purinergic receptor P2Y, G-protein coupled, 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005758  

Protein Infomation

NM_001162497 NP_001155969    
NM_001162498 NP_001155970    
NM_005767 NP_005758 P43657 7tm_1

Related Sequences

AF000546 AAB62190 P43657
BC040850 AAH40850 P43657
BC045651 AAH45651 P43657
BC070295 AAH70295 P43657
BC106756 AAI06757 P43657
EU832010 ACE86673  
EU831916 ACE87357  
HQ995530 ADZ31975 F2YGU4
JF810890 AEP43757 F2YGU4
AK223389 BAD97109 P43657
AK122856 BAG53764 P43657
AK123059 BAG53867 B3KVQ5
BX537392 CAD97634 P43657
BX537438 CAD97680 P43657
BX537445 CAD97687 P43657

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens LPAR6 NP_001155969 R.norvegicus Lpar6 691774   NP_001039308 93
M.musculus Lpar6 67168 Gene Info NP_780325 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)