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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EFCAB11, EF-hand calcium binding domain 11
Sequence ID:NM_145231
Entrez Gene ID:90141
Ensembl ID:ENSG00000140025

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q32.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 90261339 - 90421074

NM_145231 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
32009026347090263667
2012919039788490397974
2923939039886990398970
3944399041644090416485
4405359042024990420344
5366959042092990421088

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3353520Full LengthBC001787chromosome 14 open reading frame 143

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_660274  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145231 NP_660274 Q9BUY7 efhand

Related Sequences

 
mRNAGenPeptSwissProt
BC001787 AAH01787 Q9BUY7
AK094740 BAG52922 Q9BUY7
AK298930 BAH12905 B7Z5G9
AL832321 CAD38616 Q9BUY7
BX161414 CAD61889 Q9BUY7
BX247991 CAD62325 Q9BUY7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EFCAB11 NP_660274 R.norvegicus Efcab11 500705   NP_001019521 80
M.musculus 2610021K21Rik 78767 Gene Info NP_084448 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)