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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SMAD9, SMAD family member 9
Sequence ID:NM_001127217
NM_005905
RefSeqGene ID:NG_016963
Entrez Gene ID:4093
Ensembl ID:ENSG00000120693

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PULMONARY HYPERTENSION, FAMILIAL PRIMARYBMPR2

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12-q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 37417669 - 37419983

 Exon Info From UCSC:
NM_001127217
NM_005905

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4558912Full LengthBC011559SMAD family member 9
8143763Full LengthBC104760SMAD family member 9
8143765Full LengthBC104762SMAD family member 9
9051741Full LengthBC143240SMAD family member 9
5315029IncompleteBC067766SMAD family member 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005896  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001127217 NP_001120689 O15198  
NM_005905 NP_005896   MH1
MH2

Related Sequences

 
mRNAGenPeptSwissProt
BC011559 AAH11559 O15198
BC104760 AAI04761 O15198
BC104762 AAI04763 O15198
BC143240 AAI43241 O15198
EU446860 ABZ92389  
EU832070 ACE86732  
EU831977 ACE87418  
D83760 BAA21128 O15198
D83761 BAA21129 O15198

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMAD9 NP_001120689 M.musculus Smad9 55994 Gene Info NP_062356 97
R.norvegicus Smad9 85435   NP_620227 96
C.elegans sma-2 176229   NP_498931 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)