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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CDT1, Chromatin licensing and DNA replication factor 1
Sequence ID:NM_030928
RefSeqGene ID:NG_028266
Entrez Gene ID:81620
Ensembl ID:ENSG00000167513

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MEIER-GORLIN SYNDROME 4 

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 88870185 - 88875666

NM_030928 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12828887018588870466
2834058887095288871074
4065428887116988871305
5437408887184788872044
7418868887213188872276
8879878887242888872528
98811768887289388873081
117713298887345888873610
133015318887368888873889
153226748887452288875664

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3048353Full LengthBC000137chromatin licensing and DNA replication factor 1
3613566Full LengthBC009410chromatin licensing and DNA replication factor 1
3867320IncompleteBC008676chromatin licensing and DNA replication factor 1
4126642IncompleteBC008860chromatin licensing and DNA replication factor 1
4329262IncompleteBC021126chromatin licensing and DNA replication factor 1
4450165IncompleteBC049205chromatin licensing and DNA replication factor 1
4564788IncompleteBC014202chromatin licensing and DNA replication factor 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030928 NP_112190 Q9H211  

Related Sequences

 
mRNAGenPeptSwissProt
AF321125 AAG45181 Q9H211
BC000137 AAH00137 Q9H211
BC008676 AAH08676 Q9H211
BC008860 AAH08860 Q9H211
BC009410 AAH09410 Q9H211
BC014202 AAH14202 Q9H211
BC021126 AAH21126 A0PJB2
BC049205 AAH49205 Q9H211
AB053172 BAB61878 Q9H211

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDT1 NP_112190 M.musculus Cdt1 67177 Gene Info NP_080290 76
R.norvegicus Cdt1 292071   NP_001099662 74
A.gambiae AgaP_AGAP005321 1276035   XP_315335 41
D.melanogaster dup 47121   NP_524878 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta