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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DEFB123, defensin, beta 123
Sequence ID:NM_153324
Entrez Gene ID:245936
Ensembl ID:ENSG00000180424

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 30028501 - 30037977

NM_153324 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11493002841030028558
1503773003783130038058

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8992081Full LengthBC126365defensin, beta 123
8992107Full LengthBC126391defensin, beta 123

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153324 NP_697019 Q8N688
Q5GRF8
 

Related Sequences

 
mRNAGenPeptSwissProt
BC126365 AAI26366 Q5GRF8
BC126391 AAI26392 Q5GRF8
AY122475 AAM93916 Q8N688
Q5GRF8
AF479701 AAQ05840 Q8N688
Q5GRF8
AY358859 AAQ89218 Q8N688
Q5GRF8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DEFB123 NP_697019 R.norvegicus Defb36 641640   NP_001032604 78
M.musculus Defb36 266620 Gene Info NP_001032324 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)