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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SRPRB, signal recognition particle receptor, B subunit
Sequence ID:NM_021203
Entrez Gene ID:58477
Ensembl ID:ENSG00000144867

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 133524671 - 133538754

NM_021203 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1112133502876133502987
113439133524519133524845
440534133525452133525546
535612133526589133526666
613695133529960133530042
696832133534433133534569
833887133535721133535775
8882826133538396133540334

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5185997Full LengthBC063001signal recognition particle receptor, B subunit
6146939Full LengthBC065299signal recognition particle receptor, B subunit

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021203 NP_067026 Q9Y5M8  

Related Sequences

 
mRNAGenPeptSwissProt
AF141882 AAD34888 Q549N5
Q9Y5M8
BC063001 AAH63001 Q9Y5M8
BC065299 AAH65299 Q549N5
Q9Y5M8
AF086914 AAP97144 Q549N5
Q9Y5M8
HQ448094 ADQ32575  
AK027525 BAB55176 Q9Y5M8
AK075531 BAC11675 Q549N5
Q9Y5M8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SRPRB NP_067026 R.norvegicus Srprb 300965   NP_001013270 91
M.musculus Srprb 20818 Gene Info NP_033301 91
A.gambiae AgaP_AGAP006688 1277277   XP_316726 42
D.melanogaster SrpRbeta 47283   NP_788485 40
A.thaliana AT5G05670 830451   NP_196186 37
C.elegans R186.3 179781   NP_506245 36
A.thaliana AT2G18770 816392   NP_179467 36
P.falciparum PFL2245w 811501   XP_001350853 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)