Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. CLCN1, Chloride channel, voltage-sensitive 1
Sequence ID:NM_000083
RefSeqGene ID:NG_009815
Entrez Gene ID:1180
Ensembl ID:ENSG00000188037

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 143018566 - 143027988

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322547Full LengthBC113495chloride channel 1, skeletal muscle
8327624Full LengthBC112156chloride channel 1, skeletal muscle
40080547Full LengthBC111586chloride channel 1, skeletal muscle

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000074  

Protein Infomation

NM_000083 NP_000074 P35523 CBS

Related Sequences

BC111586 AAI11587  
BC112156 AAI12157 P35523
BC113495 AAI13496 P35523
Z25884 CAA81103 P35523

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens CLCN1 NP_000074 R.norvegicus Clcn1 25688   NP_037279 89
M.musculus Clcn1 12723 Gene Info NP_038519 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)