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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HTR1D, 5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
Sequence ID:NM_000864
Entrez Gene ID:3352
Ensembl ID:ENSG00000179546

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.3-p34.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 23519578 - 23520712

NM_000864 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2428572351838823521221

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4299633Full LengthBC0077205-hydroxytryptamine (serotonin) receptor 1D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000855  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000864 NP_000855 P28221 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
M81589 AAA60315 P28221
BC007720 AAH07720 P28221
AF498979 AAM21126 P28221
BT007027 AAP35673 P28221
DQ893875 ABM84801  
EU176172 ABW03623  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HTR1D NP_000855 M.musculus Htr1d 15552 Gene Info NP_032335 91
R.norvegicus Htr1d 25323   NP_036984 91
A.gambiae GPR5HT1B 1278365   XP_317820 48
D.melanogaster 5-HT1B 37191   NP_001163201 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)