Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CIAO1, cytosolic iron-sulfur protein assembly 1
Sequence ID:NM_004804
Entrez Gene ID:9391
Ensembl ID:ENSG00000144021

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 96937311 - 96937787

NM_004804 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13449693188396932226
3454939693305896933206
4946059693336296933473
6066949693357396933661
6958969693419496934395
8979849693500596935092
98540289693684896939891

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3050587Full LengthBC001395cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)
5219740Full LengthBC032812cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004795  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004804 NP_004795 O76071 WD40

Related Sequences

 
mRNAGenPeptSwissProt
U63810 AAC24948 O76071
BC001395 AAH01395 O76071
BC032812 AAH32812 O76071
EF011618 ABK41108 O76071
EU176710 ABW03511  
EU176373 ABW03824  
AK223257 BAD96977 O76071
AK315568 BAG37943 B2RDJ6
AK299503 BAG61458 B4DRZ6
CR456802 CAG33083 O76071

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CIAO1 NP_004795 M.musculus Ciao1 26371 Gene Info NP_079572 95
R.norvegicus Ciao1 29231   NP_001008766 94
D.melanogaster Ciao1 36655   NP_610996 61
A.gambiae CIAO1_ANOGA 1271794   XP_310648 59
A.thaliana emb1345 817147   NP_565615 52
A.thaliana AT4G32990 829436   NP_195025 48
S.cerevisiae CIA1 851860   NP_010553 47
C.elegans Y18D10A.9 173152   NP_493247 43
N.crassa NCU05426 3879397   XP_963249 43
P.falciparum PFL0470w 811147   XP_001350503 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)