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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHMP2A, charged multivesicular body protein 2A
Sequence ID:NM_014453
NM_198426
Entrez Gene ID:27243
Ensembl ID:ENSG00000130724

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q

Chromosomal Position (from UCSC)

Chromosomal Position:19: 59062932 - 59066459

 Exon Info From UCSC:
NM_014453
NM_198426

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3051024Full LengthBC002502chromatin modifying protein 2A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_940818  NP_055268  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014453 NP_055268 O43633 ESCRT-III
NM_198426 NP_940818 O43633 ESCRT-III

Related Sequences

 
mRNAGenPeptSwissProt
AF042384 AAC00005 O43633
BC002502 AAH02502 O43633
BT007298 AAP35962 O43633
AY364248 AAQ76807 O43633
DQ892587 ABM83513  
DQ895805 ABM86731  
AK311974 BAG34913 O43633
CR457002 CAG33283 O43633

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHMP2A NP_055268 M.musculus Chmp2a 68953 Gene Info NP_081161 100
R.norvegicus Chmp2a 365191   NP_001102376 100
D.melanogaster vps2 43164   NP_651455 75
A.gambiae AgaP_AGAP001285 1281892   XP_321862 73
C.elegans Y46G5A.12 174908   NP_496717 69
A.thaliana VPS2.1 815211   NP_565336 58
N.crassa NCU00435 3872837   XP_956699 51
S.cerevisiae DID4 853868   NP_012924 47
S.pombe did4 2543521   NP_593871 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)