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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H2AE, histone cluster 1, H2ae
Sequence ID:NM_021052
Entrez Gene ID:3012
Ensembl ID:ENSG00000168274

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebrum, colon, embryonic tissue, esophagus, fetus, gastrointestinal tract, kidney, lymphoreticular, mammary gland, nervous, ovary, placenta, pooled tissue, prostate, stem cell, stomach, testis, thymus, uncharacterized tissue
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 26217176 - 26217633

NM_021052 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15642621714726217710

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939681Full LengthBC093836histone cluster 1, H2ae
7939707Full LengthBC093862histone cluster 1, H2ae

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066390  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021052 NP_066390   Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC093836 AAH93836 P04908
BC093862 AAH93862 P04908
EU446964 ABZ92493  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H2AE NP_066390 H.sapiens HIST1H2AB 8335 Gene Info NP_003504 100
M.musculus Hist1h2ac 319164 Gene Info NP_835496 100
M.musculus Hist1h2ai 319191 Gene Info NP_835489 100
M.musculus Hist1h2an 319170 Gene Info NP_835491 100
M.musculus Hist1h2ab 319172 Gene Info NP_783591 100
M.musculus Hist1h2ad 319165 Gene Info NP_835495 100
M.musculus Hist1h2ap 319171   NP_835492 100
M.musculus Hist1h2ag 319167 Gene Info NP_835493 100
M.musculus Hist1h2ao 665433 Gene Info NP_001171015 100
M.musculus Hist1h2ae 319166 Gene Info NP_835494 100
R.norvegicus Hist1h2ai 502129   XP_577577 100
R.norvegicus LOC100360754 100360754   XP_002728525 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)