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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRRC4B, leucine rich repeat containing 4B
Sequence ID:NM_001080457
Entrez Gene ID:94030
Ensembl ID:ENSG00000131409

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 51021059 - 51022326

NM_001080457 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
425245102015151022671
252528565105179851052129
285729585107120051071301

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069153Full LengthBC172459leucine rich repeat containing 4B
4941836IncompleteBC019687leucine rich repeat containing 4B
5200456IncompleteBC032460leucine rich repeat containing 4B
5289062IncompleteBC056207leucine rich repeat containing 4B
40026281IncompleteBC131897leucine rich repeat containing 4B
100062357BC156079leucine rich repeat containing 4B

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080457 NP_001073926 Q9NT99  

Related Sequences

 
mRNAGenPeptSwissProt
BC019687 AAH19687 Q9NT99
BC032460 AAH32460 A0PJJ4
BC056207 AAH56207 Q9NT99
BC131897 AAI31898 A2VDK1
BC156079 AAI56080  
BC172459 AAI72459  
AL137451 CAB70743 Q9NT99

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRRC4B NP_001073926 R.norvegicus Lrrc4b 308571   XP_218615 97
M.musculus Lrrc4b 272381 Gene Info NP_937893 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)