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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRSS50, Protease, serine, 50
Sequence ID:NM_013270
Entrez Gene ID:29122
Ensembl ID:ENSG00000206549

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 46753712 - 46759373

NM_013270 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
173834675360546753971
3845504675439046754556
5518344675570746755990
8359974675702446757186
99811984675892646759126
119913634675920846759372

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4822455Full LengthBC033016testes-specific protease 50
5272458Full LengthBC037775testes-specific protease 50

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037402  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013270 NP_037402 Q9UI38 Trypsin

Related Sequences

 
mRNAGenPeptSwissProt
AF100707 AAF22500 Q9UI38
BC033016 AAH33016 Q9UI38
BC037775 AAH37775 Q9UI38
EU176497 ABW03298  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRSS50 NP_037402 M.musculus Prss50 235631 Gene Info NP_666339 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)