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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LETM1, leucine zipper-EF-hand containing transmembrane protein 1
Sequence ID:NM_012318
RefSeqGene ID:NG_013063
Entrez Gene ID:3954
Ensembl ID:ENSG00000168924

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p16.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 1814759 - 1857974

 Exon Info From UCSC:
NM_012318

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4126510Full LengthBC021208leucine zipper-EF-hand containing transmembrane protein 1
4860194Full LengthBC014500leucine zipper-EF-hand containing transmembrane protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036450  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012318 NP_036450 O95202 LETM1

Related Sequences

 
mRNAGenPeptSwissProt
AF061025 AAD13138 O95202
BC014500 AAH14500 O95202
BC021208 AAH21208 O95202
DQ893606 ABM84532  
AK293572 BAG57043 O95202
AL133650 CAB63769 O95202

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LETM1 NP_036450 M.musculus Letm1 56384 Gene Info NP_062668 84
R.norvegicus Letm1 305457   NP_001005884 84
A.gambiae AgaP_AGAP003296 1279756   XP_319522 46
D.melanogaster Letm1 37912   NP_611922 45
C.elegans letm-1 179854   NP_506382 42
A.thaliana AT3G59820 825151   NP_191541 38
S.cerevisiae MDM38 854130   NP_014615 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)