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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPTA1, spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
Sequence ID:NM_003126
RefSeqGene ID:NG_011474
Entrez Gene ID:6708
Ensembl ID:ENSG00000163554

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ELLIPTOCYTOSIS-2 
PYROPOIKILOCYTOSIS 
SPHEROCYTOSIS, TYPE 3 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 158581019 - 158581179

 Exon Info From UCSC:
NM_003126

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069191Full LengthBC172497spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
100063156BC156496spectrin, alpha, erythrocytic 1 (elliptocytosis 2)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003126 NP_003117 P02549  

Related Sequences

 
mRNAGenPeptSwissProt
M11049 AAA60569 P02549
M61877 AAA60577 P02549
AF060556 AAC15757 O60686
BC156496 AAI56497  
BC172497 AAI72497 P02549

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPTA1 NP_003117 M.musculus Spna1 20739 Gene Info NP_035595 81
R.norvegicus Spta1 289257   NP_001011908 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)