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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARF3, ADP-ribosylation factor 3
Sequence ID:NM_001659
Entrez Gene ID:377
Ensembl ID:ENSG00000134287

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 49332729 - 49334878

NM_001659 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2029194932999149332890
292030444933343749333561
304531554933377949333889
315633964933473049334970
339735564935109249351251

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2967578Full LengthBC017565ADP-ribosylation factor 3
3537965Full LengthBC007647ADP-ribosylation factor 3
4126378Full LengthBC007762ADP-ribosylation factor 3
4817874Full LengthBC028402ADP-ribosylation factor 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001650  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001659 NP_001650 P61204 Arf

Related Sequences

 
mRNAGenPeptSwissProt
M74491 AAB59425 P61204
BC007647 AAH07647 P61204
BC007762 AAH07762 P61204
BC017565 AAH17565 P61204
BC028402 AAH28402 P61204
AF493882 AAM12596 P61204
BT006670 AAP35316 P61204
EU832818 ACE87829  
GQ129444 ACT64578  
AK291633 BAF84322 P61204
AK303726 BAG64702 B4E190
AK316528 BAH14899 B7ZB63

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARF3 NP_001650 M.musculus Arf3 11842 Gene Info NP_031504 100
R.norvegicus Arf3 140940   NP_543180 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)