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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SMC2, structural maintenance of chromosomes 2
Sequence ID:NM_001042550
Entrez Gene ID:10592
Ensembl ID:ENSG00000136824

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 106856606 - 106901938

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052683Full LengthBC144163structural maintenance of chromosomes 2
40146416Full LengthBC130385structural maintenance of chromosomes 2
3448562IncompleteBC003396structural maintenance of chromosomes 2
4363420IncompleteBC061906structural maintenance of chromosomes 2
4699860IncompleteBC017845structural maintenance of chromosomes 2
5498410IncompleteBC032705structural maintenance of chromosomes 2
6622257IncompleteBC107891structural maintenance of chromosomes 2
6654356IncompleteBC071750structural maintenance of chromosomes 2
6708852IncompleteBC055081structural maintenance of chromosomes 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006435  

Protein Infomation

NM_001042550 NP_001036015    
NM_001042551 NP_001036016    
NM_001265602 NP_001252531    
NM_006444 NP_006435 O95347 SMC_N

Related Sequences

U46075 AAA86843 Q13497
AF092563 AAC72360 O95347
AF113673 AAF29579 O95347
BC003396 AAH03396 A0JLM9
BC017845 AAH17845 Q05D74
BC032705 AAH32705 Q05BV1
BC055081 AAH55081 Q7Z2X1
BC061906 AAH61906 Q6P712
BC071750 AAH71750 Q6IPS5
BC107891 AAI07892 Q32Q15
BC130385 AAI30386 O95347
BC144163 AAI44164 B7ZLZ7
AY739716 AAW65985 Q2KQ72
AK292599 BAF85288 A8K984
AK000955 BAG50839 B3KM27
AK001485 BAG50923 B3KMB1
BN000163 CAD89875 O95347
AL833191 CAI46187 O95347

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SMC2 NP_006435 R.norvegicus Smc2 362519   NP_001102136 93
M.musculus Smc2 14211 Gene Info NP_032043 92
A.gambiae AgaP_AGAP011425 1278267   XP_554796 48
A.thaliana ATSMC2 823900   NP_190330 46
A.thaliana SMC2 836362   NP_201047 46
N.crassa NCU07679 3878460   XP_962321 41
D.melanogaster SMC2 36653   NP_610995 41
S.cerevisiae SMC2 850589   NP_116687 37
S.pombe cut14 2541319   NP_596180 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)