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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GSDMD, Gasdermin D
Sequence ID:NM_001166237
NM_024736
Entrez Gene ID:79792
Ensembl ID:ENSG00000104518

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 144640082 - 144645231

 Exon Info From UCSC:
NM_001166237
NM_024736

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3634992Full LengthBC008904gasdermin D
6213121Full LengthBC069000gasdermin D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079012  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166237 NP_001159709    
NM_024736 NP_079012 P57764 Gasdermin

Related Sequences

 
mRNAGenPeptSwissProt
AY008304 AAG22861 P57764
BC008904 AAH08904 P57764
BC069000 AAH69000 P57764
AF318341 AAL55848 Q8WYV7
AK022212 BAB13986 P57764
AK127941 BAC87201 Q6ZRV8
AK291817 BAF84506 A8K702
AK096216 BAG53233 B3KTX1
AK123985 BAG53989 B3KW27
AK303615 BAG64625 B4E113

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GSDMD NP_001159709 R.norvegicus Gsdmd 315084   NP_001124025 61
M.musculus Gsdmd 69146 Gene Info NP_081236 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)