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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. GATAD2A, GATA zinc finger domain containing 2A
Sequence ID:NM_017660
Entrez Gene ID:54815
Ensembl ID:ENSG00000167491

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal medulla, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 19611971 - 19618062

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3953055Full LengthBC011684GATA zinc finger domain containing 2A
3864801IncompleteBC012902GATA zinc finger domain containing 2A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060130  

Protein Infomation

NM_017660 NP_060130 Q86YP4 GATA

Related Sequences

BC011684 AAH11684 Q86YP4
BC012902 AAH12902 Q86YP4
AY186731 AAO31797 Q86YP4
EU446496 ABZ92025  
AK000092 BAA90939 Q86YP4
AK296781 BAG59359 B4DKZ7
AK303482 BAG64518 B4E0Q6
AL390164 CAB99095 Q86YP4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens GATAD2A NP_060130 R.norvegicus Gatad2a 290669   NP_001013903 90
M.musculus Gatad2a 234366 Gene Info NP_663571 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)