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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXC13, homeobox C13
Sequence ID:NM_017410
Entrez Gene ID:3229
Ensembl ID:ENSG00000123364

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ECTODERMAL DYSPLASIA 9, HAIR/NAIL TYPE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 54332575 - 54340328

NM_017410 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18515433257554333425
85223955433878354340326

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6171228Full LengthBC090850homeobox C13
3629265IncompleteBC002754homeobox C13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059106  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017410 NP_059106 P31276 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
AF255676 AAF67760 P31276
AF263466 AAF73439 P31276
BC090850 AAH90850 P31276
BT009908 AAP88910 P31276
AK024027 BAB14786 P31276
X99679 CAA67995 Q6LAM3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXC13 NP_059106 M.musculus Hoxc13 15422 Gene Info NP_034594 99
R.norvegicus Hoxc13 315337   XP_235695 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)