Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FSCN1, fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
Sequence ID:NM_003088
RefSeqGene ID:NG_030004
Entrez Gene ID:6624
Ensembl ID:ENSG00000075618

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7p22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 5632438 - 5646279

NM_003088 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
194656324535633398
947110356428875643043
1104122556431265643247
1226139356434935643660
1394277656449025646284

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961047Full LengthBC000521fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
2961047Full LengthBC007988fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
4100996Full LengthBC006304fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
4299524Full LengthBC007948fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
3029477IncompleteBC007539fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
3534502IncompleteBC007643fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003079  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003088 NP_003079 Q16658 Fascin

Related Sequences

 
mRNAGenPeptSwissProt
U09873 AAA62201 Q16658
U03057 AAA86442 Q16658
BC000521 AAH00521 Q16658
BC006304 AAH06304 Q16658
BC007539 AAH07539 Q96IH1
BC007643 AAH07643 Q16658
BC007948 AAH07948 Q16658
BC007988 AAH07988 Q16658
BT006636 AAP35282 Q16658
DQ891402 ABM82328  
DQ894580 ABM85506  
AK316607 BAG38194 Q16658
AK095254 BAG53015 B3KTA3
AK095830 BAG53141 B3KTM9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FSCN1 NP_003079 M.musculus Fscn1 14086 Gene Info NP_032010 97
D.melanogaster sn 31717   NP_001162696 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)