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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UBE3C, ubiquitin protein ligase E3C
Sequence ID:NM_014671
Entrez Gene ID:9690
Ensembl ID:ENSG00000009335

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q36.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 157024080 - 157025456

 Exon Info From UCSC:
NM_014671

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4541634Full LengthBC014029ubiquitin protein ligase E3C

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014671 NP_055486 Q15386  

Related Sequences

 
mRNAGenPeptSwissProt
BC014029 AAH14029 Q15386
BC026241 AAH26241 Q15386
D13635 BAA02799 Q15386
AK295138 BAG58161 B4DHJ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBE3C NP_055486 M.musculus Ube3c 100763 Gene Info NP_598668 93
R.norvegicus Ube3c 362294   XP_347040 93
A.gambiae AgaP_AGAP011474 1278379   XP_317832 46
D.melanogaster CG3356 37876   NP_611896 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)