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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CACNA1C, calcium channel, voltage-dependent, L type, alpha 1C subunit
Sequence ID:NM_000719
NM_001129827
NM_001129829
NM_001129830
NM_001129831
NM_001129832
NM_001129833
NM_001129834
NM_001129835
NM_001129836
NM_001129837
NM_001129838
NM_001129839
NM_001129840
NM_001129841
NM_001129842
NM_001129843
NM_001129844
NM_001129846
NM_001167623
NM_001167624
NM_001167625
NM_199460
RefSeqGene ID:NG_008801
Entrez Gene ID:775
Ensembl ID:ENSG00000151067

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
BRUGADA SYNDROME 3 
TIMOTHY SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 2162703 - 2724137

 Exon Info From UCSC:
NM_000719
NM_001129827
NM_001129829
NM_001129830
NM_001129831
NM_001129832
NM_001129833
NM_001129834
NM_001129835
NM_001129836
NM_001129837
NM_001129838
NM_001129839
NM_001129840
NM_001129841
NM_001129842
NM_001129843
NM_001129844
NM_001129846
NM_001167623
NM_001167624
NM_001167625
NM_199460

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9056774Full LengthBC146846calcium channel, voltage-dependent, L type, alpha 1C subunit

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000719 NP_000710    
NM_001129827 NP_001123299    
NM_001129829 NP_001123301    
NM_001129830 NP_001123302    
NM_001129831 NP_001123303    
NM_001129832 NP_001123304    
NM_001129833 NP_001123305    
NM_001129834 NP_001123306    
NM_001129835 NP_001123307    
NM_001129836 NP_001123308    
NM_001129837 NP_001123309    
NM_001129838 NP_001123310    
NM_001129839 NP_001123311    
NM_001129840 NP_001123312    
NM_001129841 NP_001123313    
NM_001129842 NP_001123314    
NM_001129843 NP_001123315    
NM_001129844 NP_001123316    
NM_001129846 NP_001123318    
NM_001167623 NP_001161095    
NM_001167624 NP_001161096    
NM_001167625 NP_001161097    
NM_199460 NP_955630 Q13936  

Related Sequences

 
mRNAGenPeptSwissProt
L29529 AAA51899 Q13936
L29534 AAA51900 Q13936
L29536 AAA51901 Q13936
M57971 AAA62832 Q13936
M57972 AAB59461 Q13936
AF070589 AAC28649 O95234
BC093695 AAH93695 Q4G0H8
BC146846 AAI46847 Q13936
AF465484 AAM70049 Q13936
AY129012 AAM98755 Q6YL47
AY562395 AAT67986 Q5V9X9
AY562396 AAT67987 Q5V9X8
AY830711 AAX37354 Q13936
AY830712 AAX37355 Q13936
AY830713 AAX37356 Q13936
AB209016 BAD92253 Q59GU3
AK302698 BAH13781 B7Z7Z5
AJ224873 CAA12174 Q13936
Z26294 CAA81218 Q13936
Z26295 CAA81219 Q13936
Z34809 CAA84340 Q13936
Z34810 CAA84341 Q13936
Z34811 CAA84342 Q13936
Z34812 CAA84343 Q13936
Z34813 CAA84344 Q13936
Z34814 CAA84345 Q13936
Z34815 CAA84346 Q13936
Z34816 CAA84347 Q13936
Z34817 CAA84348 Q13936
Z34818 CAA84349 Q13936
Z34819 CAA84350 Q13936
Z34820 CAA84351 Q13936
Z34821 CAA84352 Q13936
Z34822 CAA84353 Q13936
Z74996 CAA99284 Q13936
AJ536834 CAD61168 Q86XX1
AJ537510 CAD61169 Q86XX0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CACNA1C NP_955630 M.musculus Cacna1c 12288 Gene Info NP_033911 95
R.norvegicus Cacna1c 24239   NP_036649 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)