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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BST2, Bone marrow stromal cell antigen 2
Sequence ID:NM_004335
Entrez Gene ID:684
Ensembl ID:ENSG00000130303

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 17513801 - 17516401

NM_004335 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
374161751375517514134
4175611751448817514632
5626221751493717514997
6236891751517917515245
6909741751609917516383

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5217945Full LengthBC033873bone marrow stromal cell antigen 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004335 NP_004326 Q10589  

Related Sequences

 
mRNAGenPeptSwissProt
BC033873 AAH33873 Q10589
AY320402 AAP73804 Q7Z5Z8
D28137 BAA05679 Q10589
AK223124 BAD96844 Q10589
AK291099 BAF83788 Q10589
AK303593 BAG64608 B4E0Z6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BST2 NP_004326 M.musculus Bst2 69550 Gene Info NP_932763 47
R.norvegicus Bst2 378947   NP_937767 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)