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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CABP5, calcium binding protein 5
Sequence ID:NM_019855
NM_016367
Entrez Gene ID:56344
Ensembl ID:ENSG00000105507

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 48533236 - 48547304

Transcript StartTranscript EndChromosomal Start Chromosomal End
186474853320948533838
6487954853747148537618
7969054854246448542573
90610494854386148544004
105010804854482948544859
108112684854711648547303

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991849Full LengthBC126133calcium binding protein 5
8991851Full LengthBC126135calcium binding protein 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062829  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019855 NP_062829 Q9NP86 efhand

Related Sequences

 
mRNAGenPeptSwissProt
AF169159 AAF25793 Q9NP86
BC126133 AAI26134 Q9NP86
BC126135 AAI26136 Q9NP86
HQ258076 ADR82830  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CABP5 NP_062829 R.norvegicus Cabp5 365194   NP_001102377 94
M.musculus Cabp5 29865 Gene Info NP_038905 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)