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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SLC22A1, solute carrier family 22 (organic cation transporter), member 1
Sequence ID:NM_003057
Entrez Gene ID:6580
Ensembl ID:ENSG00000175003

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 160542904 - 160579748

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8992080Full LengthBC126364solute carrier family 22 (organic cation transporter), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_694857  NP_003048  

Protein Infomation

NM_003057 NP_003048 O15245 MFS_1
NM_153187 NP_694857   Sugar_tr

Related Sequences

U77086 AAB67703 O15245
BC126364 AAI26365 O15245
HQ258293 ADR83047  
AK289887 BAF82576 O15245
X98332 CAA66977 O15245

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SLC22A1 NP_003048 M.musculus Slc22a1 20517 Gene Info NP_033228 78
R.norvegicus Slc22a1 24904   NP_036829 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)