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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ECM2, extracellular matrix protein 2, female organ and adipocyte specific
Sequence ID:NM_001197295
NM_001197296
NM_001393
Entrez Gene ID:1842
Ensembl ID:ENSG00000106823

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 95257598 - 95298252

Transcript StartTranscript EndChromosomal Start Chromosomal End
111679525759895258764
116814949526300895263334
149516349526479495264933
163517929526781495267971
179319289527218095272315
192920449527429295274407
204526179527691295277484
261828069527996895280156
280731259528485695285174
312631639529821495298251

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40035034Full LengthBC105958extracellular matrix protein 2, female organ and adipocyte specific
40035036Full LengthBC107493extracellular matrix protein 2, female organ and adipocyte specific
5725929IncompleteBC036806extracellular matrix protein 2, female organ and adipocyte specific

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001384  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001197295 NP_001184224    
NM_001197296 NP_001184225    
NM_001393 NP_001384 O94769 VWC
LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC036806 AAH36806 Q6PID0
BC105958 AAI05959 Q3KR19
BC107493 AAI07494 O94769
AB011792 BAA33958 O94769
AK312820 BAG35677 O94769
AK296458 BAG59105 B4DK93
AK298278 BAG60538 B4DPC6
AK303922 BAG64850 B4E1N8
BX537976 CAD97940 O94769
AM393123 CAL38001  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ECM2 NP_001384 M.musculus Ecm2 407800 Gene Info NP_001012324 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)