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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FOXR1, forkhead box R1
Sequence ID:NM_181721
Entrez Gene ID:283150
Ensembl ID:ENSG00000176302

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 118842416 - 118852001

NM_181721 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1286118842416118842701
287361118849491118849565
362609118849666118849913
610836118850151118850377
8371075118851199118851437
10761152118851917118851993

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5164198Full LengthBC038969forkhead box R1
5167039Full LengthBC028191forkhead box R1
40115641Full LengthBC125040forkhead box R1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_859072  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_181721 NP_859072 Q6PIV2 Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
BC028191 AAH28191 Q6PIV2
BC038969 AAH38969 Q6PIV2
BC125040 AAI25041 Q08AS8
AB094092 BAC76046 Q6PIV2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOXR1 NP_859072 R.norvegicus Foxr1 315601   XP_243815 78
M.musculus Foxr1 382074 Gene Info NP_001028641 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)