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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDH11, cadherin 11, type 2, OB-cadherin (osteoblast)
Sequence ID:NM_001797
RefSeqGene ID:NG_029491
Entrez Gene ID:1009
Ensembl ID:ENSG00000140937

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 64981410 - 65038805

 Exon Info From UCSC:
NM_001797

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4183901Full LengthBC013609cadherin 11, type 2, OB-cadherin (osteoblast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001788  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001797 NP_001788 P55287 Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
L34056 AAA35622 P55287
BC013609 AAH13609 Q96CZ9
JF432268 ADZ15485  
D21254 BAA04798 P55287
D21255 BAA04799 P55287
AB209760 BAD92997 Q59EQ1
AK291251 BAF83940 P55287
AK297377 BAG59819 B4DMA7
AK294872 BAH11907 B7Z2M1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH11 NP_001788 R.norvegicus Cdh11 84407   NP_445844 98
M.musculus Cdh11 12552 Gene Info NP_033996 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)