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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACSL5, Acyl-CoA synthetase long-chain family member 5
Sequence ID:NM_203380
NM_016234
NM_203379
Entrez Gene ID:51703
Ensembl ID:ENSG00000197142

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q25.1-q25.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 114136081 - 114188133

 Exon Info From UCSC:
NM_203380
NM_016234
NM_203379

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2959548Full LengthBC007985acyl-CoA synthetase long-chain family member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_976314  NP_057318  NP_976313  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016234 NP_057318     AMP-binding
NM_203379 NP_976313 Q9ULC5 EC 6.2.1.3 AMP-binding
NM_203380 NP_976314 Q9ULC5 EC 6.2.1.3 AMP-binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC007985 AAH07985 Q9ULC5 EC 6.2.1.3
AY358520 AAQ88884 Q9ULC5 EC 6.2.1.3
DQ893266 ABM84192    
DQ896596 ABM87595    
AB033899 BAA85979 Q9ULC5 EC 6.2.1.3
AK301786 BAG63242 B4DX30  
AJ496489 CAD43000    
AM262166 CAK18174 A6GV77  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACSL5 NP_057318 R.norvegicus Acsl5 94340   NP_446059 81
M.musculus Acsl5 433256 Gene Info NP_082252 81
D.melanogaster CG3961 40056   NP_649067 50
A.gambiae AgaP_AGAP011603 1281025   XP_320900 49
C.elegans acs-13 171643   NP_490744 49
A.thaliana LACS7 832820   NP_198112 47
N.crassa NCU01654 3872414   XP_956276 39
S.cerevisiae FAA2 856734   NP_010931 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)