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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STYXL1, Serine/threonine/tyrosine interacting-like 1
Sequence ID:NM_016086
Entrez Gene ID:51657
Ensembl ID:ENSG00000127952

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 75625659 - 75677321

NM_016086 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
152767562565575625916
2773897563020775630319
3904877563307575633172
4886337563457675634721
6347797564305975643204
7809217565116875651309
9229837565795975658020
98410877565973875659841
108814297567697975677320

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2988900Full LengthBC024035serine/threonine/tyrosine interacting-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057170  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016086 NP_057170 Q9Y6J8 DSPc

Related Sequences

 
mRNAGenPeptSwissProt
AF069762 AAD36983 Q9Y6J8
AF169647 AAD53723 Q9Y6J8
AF169648 AAD53724 Q9Y6J8
AF188201 AAF04111 Q9Y6J8
AF188202 AAF04112 Q9Y6J8
AF188203 AAF04113 Q9Y6J8
AF188204 AAF04114 Q9Y6J8
BC024035 AAH24035 Q9Y6J8
DQ893420 ABM84346  
DQ896739 ABM87738  
EU831691 ACE86525  
EU831604 ACE87204  
BX537896 CAD97887 Q7Z3H6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STYXL1 NP_057170 M.musculus Styxl1 76571 Gene Info NP_083935 66
R.norvegicus Styxl1 360792   NP_001032877 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)